C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nuclear receptor subfamily 1, group H, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000321046 NR1H4-004 ENSG00000012504 9606 + 12:100473916-100563511 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000321046
Transcript ID Ovary
ENST00000321046 0.344±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BW CIL_0006BW_0002 CGP 12:100357079-100564413

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000142170 thrb-002 processed_transcript Danio_rerio 0.00000000000004 84
ENSDART00000017869 thrb-001 nonsense_mediated_decay Danio_rerio 0.00000000000004 84
ENSDART00000151766 thrb-003 protein_coding Danio_rerio 0.00000000000004 84

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