C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 109, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000321753 FAM109B-001 ENSG00000177096 9606 + 22:42074251-42079441 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321753
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321753 5.819±0.00 6.147±0.00 0.474±0.00 0.490±0.06 3.943±1.35 3.192±1.56 1.207±0.95 2.362±1.98 1.009±0.05 1.381±0.75 0.569±0.00 4.957±2.07 16.059±5.87 3.797±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BB CIL_0004BB_0001 CGP 22:42058354-42079441
CIL_00037D CIL_00037D_0001 CGP 22:42074251-42084284

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001881 IMP receptor recycling
GO:0005515 IPI protein binding
GO:0005769 IDA early endosome
GO:0005802 IDA trans-Golgi network
GO:0007032 IMP endosome organization
GO:0030136 IDA clathrin-coated vesicle
GO:0042147 IMP retrograde transport, endosome to Golgi
GO:0042803 IPI protein homodimerization activity
GO:0055037 IDA recycling endosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161178 Fam109b-002 protein_coding Mus_musculus 0 645
ENSMUST00000050349 Fam109b-001 protein_coding Mus_musculus 0 645

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