C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 72, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000322122 TRIM72-001 ENSG00000177238 9606 + 16:31214021-31225189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryTestisENST00000322122
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000322122 0.175±0.00 0.271±0.00 0.137±0.09 1.169±1.03 0.211±0.00 0.331±0.31 0.134±0.09 0.055±0.00 33.478±25.01 1.141±1.30 0.725±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035T CIL_00035T_0001 CGP 16:31201485-31226427

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001778 ISS plasma membrane repair
GO:0001786 ISS phosphatidylserine binding
GO:0003012 ISS muscle system process
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0006887 IEA exocytosis
GO:0007517 ISS muscle organ development
GO:0008270 IEA zinc ion binding
GO:0030659 ISS cytoplasmic vesicle membrane
GO:0042383 ISS sarcolemma
GO:0046872 IEA metal ion binding
GO:0051260 ISS protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106248 Trim72-001 protein_coding Mus_musculus 0 1578
ENSMUST00000081042 Trim72-201 protein_coding Mus_musculus 0 1537

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