C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000324000 ST8SIA3-001 ENSG00000177511 9606 + 18:57350813-57368933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324000
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324000 8.183±0.59 0.051±0.04 0.062±0.05 0.001±0.00 0.169±0.16 0.013±0.00 0.009±0.01 0.003±0.00 0.001±0.00 0.006±0.00 0.263±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OB CIL_0006OB_0001 CGP 18:57350813-57491297

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001574 IDA ganglioside biosynthetic process
GO:0003828 IDA alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity
GO:0006486 IDA:IEA protein glycosylation
GO:0006491 IDA N-glycan processing
GO:0006688 TAS glycosphingolipid biosynthetic process
GO:0008373 IEA sialyltransferase activity
GO:0009100 IDA glycoprotein metabolic process
GO:0009311 IDA oligosaccharide metabolic process
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0030173 IEA integral component of Golgi membrane
GO:0033691 IC sialic acid binding
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025477 St8sia3-001 protein_coding Mus_musculus 0 1986
ENSMUST00000139622 St8sia3-002 protein_coding Mus_musculus 0 926
ENSMUST00000129518 St8sia3-004 retained_intron Mus_musculus 0 835
ENSMUST00000134064 St8sia3-003 processed_transcript Mus_musculus 0 749

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