C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329134 UTY-003 ENSG00000183878 9606 - Y:13323034-13480670 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverOvaryENST00000329134
Transcript ID Heart Liver Ovary
ENST00000329134 1.748±0.00 0.194±0.00 0.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021T CIL_00021T_0002 CGP Y:12904937-13480673

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0010468 IEA regulation of gene expression
GO:0046872 IEA metal ion binding
GO:0051213 IEA dioxygenase activity
GO:0055114 IEA oxidation-reduction process
GO:0071557 IEA histone H3-K27 demethylation
GO:0071558 IEA histone demethylase activity (H3-K27 specific)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052368 Kdm6a-002 protein_coding Mus_musculus 0 1790
ENSMUST00000044484 Kdm6a-001 protein_coding Mus_musculus 0 1790
ENSMUST00000130978 Kdm6a-003 retained_intron Mus_musculus 0 1489
ENSMUST00000137048 Uty-006 protein_coding Mus_musculus 0 1216
ENSMUST00000069309 Uty-001 protein_coding Mus_musculus 0 1158
ENSMUST00000139365 Uty-004 protein_coding Mus_musculus 0 1155
ENSMUST00000154004 Uty-005 protein_coding Mus_musculus 0 1101
ENSMUST00000143286 Uty-008 protein_coding Mus_musculus 0 983
ENSMUST00000154666 Uty-007 nonsense_mediated_decay Mus_musculus 0 822
ENSMUST00000143958 Uty-002 nonsense_mediated_decay Mus_musculus 0 819
ENSDART00000088469 kdm6a-201 protein_coding Danio_rerio 0 743
ENSDART00000144623 kdm6a-001 protein_coding Danio_rerio 0 743
ENSMUST00000157073 Uty-003 processed_transcript Mus_musculus 0 350

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