C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139365 Uty-004 ENSMUSG00000068457 10090 - Y:1097671-1245724 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartLiverLungMusclePlacentaTestisENSMUST00000139365
Transcript ID Adrenal Colon Heart Liver Lung Muscle Placenta Testis
ENSMUST00000139365 0.195±0.12 1.518±0.00 0.405±0.00 0.538±0.03 1.461±0.30 0.456±0.00 0.190±0.00 0.177±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001701 IMP in utero embryonic development
GO:0003007 IMP heart morphogenesis
GO:0005515 IPI protein binding
GO:0007507 IMP heart development
GO:0010468 IMP regulation of gene expression
GO:0031935 IMP regulation of chromatin silencing
GO:0043234 IDA protein complex
GO:0045184 IDA establishment of protein localization
GO:0046872 IEA metal ion binding
GO:0048568 IMP embryonic organ development
GO:0051864 IMP histone demethylase activity (H3-K36 specific)
GO:0060070 IDA canonical Wnt signaling pathway
GO:0070544 IMP histone H3-K36 demethylation
GO:0071557 IEA histone H3-K27 demethylation
GO:0071558 IEA histone demethylase activity (H3-K27 specific)
GO:0086003 IMP cardiac muscle cell contraction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000088469 kdm6a-201 protein_coding Danio_rerio 0 628
ENSDART00000144623 kdm6a-001 protein_coding Danio_rerio 0 628
ENST00000329134 UTY-003 protein_coding Homo_sapiens 0 1155
ENST00000331397 UTY-001 protein_coding Homo_sapiens 0 2109
ENST00000362096 UTY-002 protein_coding Homo_sapiens 0 1744
ENST00000377967 KDM6A-001 protein_coding Homo_sapiens 0 2006
ENST00000382896 UTY-201 protein_coding Homo_sapiens 0 2109
ENST00000382899 KDM6A-201 protein_coding Homo_sapiens 0 2006
ENST00000414389 KDM6A-002 protein_coding Homo_sapiens 0 2006
ENST00000431196 KDM6A-008 protein_coding Homo_sapiens 0 337
ENST00000433797 KDM6A-003 protein_coding Homo_sapiens 0 2006
ENST00000451692 KDM6A-005 protein_coding Homo_sapiens 0 462
ENST00000475233 KDM6A-004 processed_transcript Homo_sapiens 0 420
ENST00000478900 UTY-006 processed_transcript Homo_sapiens 0 307
ENST00000484732 KDM6A-007 processed_transcript Homo_sapiens 0 444
ENST00000536777 KDM6A-202 protein_coding Homo_sapiens 0 2006
ENST00000537580 UTY-202 protein_coding Homo_sapiens 0 1892
ENST00000538878 UTY-203 protein_coding Homo_sapiens 0 2109
ENST00000540140 UTY-204 protein_coding Homo_sapiens 0 2109
ENST00000543216 KDM6A-203 protein_coding Homo_sapiens 0 1616
ENST00000545955 UTY-205 protein_coding Homo_sapiens 0 2109
ENST00000611820 KDM6A-204 protein_coding Homo_sapiens 0 2006
ENST00000612274 UTY-206 protein_coding Homo_sapiens 0 1463
ENST00000617789 UTY-207 protein_coding Homo_sapiens 0 2109
ENST00000618474 UTY-208 protein_coding Homo_sapiens 0 2109
ENST00000621147 KDM6A-205 protein_coding Homo_sapiens 0 556
ENST00000623120 UTY-209 protein_coding Homo_sapiens 0 2097
ENST00000623507 UTY-210 protein_coding Homo_sapiens 0 1744
ENST00000623605 UTY-208 protein_coding Homo_sapiens 0 2097
ENST00000623852 UTY-203 protein_coding Homo_sapiens 0 1153
ENST00000624098 UTY-202 protein_coding Homo_sapiens 0 1892
ENST00000624415 UTY-201 protein_coding Homo_sapiens 0 2097
ENST00000624483 UTY-206 protein_coding Homo_sapiens 0 2097
ENST00000624574 UTY-205 protein_coding Homo_sapiens 0 2097
ENST00000624729 UTY-207 protein_coding Homo_sapiens 0 2097
ENST00000624787 UTY-209 protein_coding Homo_sapiens 0 2097
ENST00000624950 UTY-204 protein_coding Homo_sapiens 0 1461

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