C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: topoisomerase (DNA) I, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329245 TOP1MT-001 ENSG00000184428 9606 - 8:143309324-143334896 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000329245
Transcript ID Adrenal Bladder Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000329245 6.604±0.00 0.527±0.00 2.300±0.98 0.222±0.16 0.622±0.25 1.692±0.00 2.980±0.00 1.871±0.00 22.191±13.05 7.663±1.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399
CIL_0001NH CIL_0001NH_0001 CGP 8:143304384-143384220

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003917 IEA:IBA DNA topoisomerase type I activity
GO:0003918 IEA DNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0005634 IDA nucleus
GO:0005694 IEA chromosome
GO:0005739 IDA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0006260 IBA DNA replication
GO:0006265 IEA:IBA DNA topological change
GO:0042645 IDA mitochondrial nucleoid

Homologs

No Homologs available.

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