C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclic nucleotide gated channel alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329903 CNGA2-001 ENSG00000183862 9606 + X:151738451-151745304 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000329903
Transcript ID Testis
ENST00000329903 0.103±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AW CIL_0001AW_0001 CGP X:151716035-151745304
CIL_000117 CIL_000117_0001 CGP X:151738451-151925170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005223 IBA intracellular cGMP activated cation channel activity
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005516 IEA calmodulin binding
GO:0005887 IBA integral component of plasma membrane
GO:0006811 IEA ion transport
GO:0007603 IBA phototransduction, visible light
GO:0007608 IEA sensory perception of smell
GO:0016020 IEA membrane
GO:0030552 IEA cAMP binding
GO:0030553 IBA cGMP binding
GO:0042391 IBA regulation of membrane potential
GO:0055085 IEA transmembrane transport
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006020 Cnga2-001 protein_coding Mus_musculus 0 2392
ENSMUST00000027288 Cnga3-201 protein_coding Mus_musculus 0 580

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