C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth differentiation factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329913 GDF3-001 ENSG00000184344 9606 - 12:7689782-7695776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyMuscleOvaryTestisENST00000329913
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Muscle Ovary Testis
ENST00000329913 0.092±0.00 3.692±0.00 0.042±0.00 0.092±0.00 0.072±0.04 0.041±0.00 0.437±0.00 0.151±0.05 0.539±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001I CIL_00001I_0001 CGP 12:7649400-7695776
CIL_00001B CIL_00001B_0001 CGP 12:7689782-7717559

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IMP skeletal system development
GO:0001654 IMP eye development
GO:0001701 IEA in utero embryonic development
GO:0002021 IEA response to dietary excess
GO:0005125 IEA cytokine activity
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005737 IDA cytoplasm
GO:0007165 IEA signal transduction
GO:0007492 IEA endoderm development
GO:0007498 IEA mesoderm development
GO:0008083 IEA growth factor activity
GO:0010453 IDA regulation of cell fate commitment
GO:0019901 IPI protein kinase binding
GO:0030514 IDA negative regulation of BMP signaling pathway
GO:0030903 IEA notochord development
GO:0032525 IEA somite rostral/caudal axis specification
GO:0040007 IEA growth
GO:0045605 IDA negative regulation of epidermal cell differentiation
GO:0045662 IEA negative regulation of myoblast differentiation
GO:0048859 IEA formation of anatomical boundary
GO:0090009 IEA primitive streak formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032211 Gdf3-001 protein_coding Mus_musculus 0 723

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