C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00001I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111701-ENSG00000184344 CGP 9606 12:7649400-7695776
GeneTranscriptPositionBiotype
ENSG00000111701 (APOBEC1)
apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
ENST00000229304 (APOBEC1-001) 7649400-7665893 protein_coding
ENST00000467171 (APOBEC1-002) 7649400-7665903 nonsense_mediated_decay
ENSG00000184344 (GDF3)
growth differentiation factor 3
ENST00000329913 (GDF3-001) 7689782-7695776 protein_coding
CIL_00001I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040613-ENSMUSG00000030117 CGP 10090 6:122577792-122610087
GeneTranscriptPositionBiotype
ENSMUSG00000030117 (Gdf3)
growth differentiation factor 3
ENSMUST00000032211 (Gdf3-001) 122605403-122610087 protein_coding
ENSMUSG00000040613 (Apobec1)
apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
ENSMUST00000112585 (Apobec1-002) 122577801-122602371 protein_coding
ENSMUST00000112586 (Apobec1-001) 122577792-122602444 protein_coding
ENSMUST00000112587 (Apobec1-201) 122577799-122600127 protein_coding
ENSMUST00000143356 (Apobec1-004) 122588053-122602364 processed_transcript
ENSMUST00000147760 (Apobec1-003) 122587322-122602370 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001I_0001ENSG00000111701ENST00000229304ENST00000467171ENSG00000184344ENST00000329913CIL_00001I_0002ENSMUSG00000030117ENSMUST00000032211ENSMUSG00000040613ENSMUST00000112585ENSMUST00000112586ENSMUST00000112587ENSMUST00000143356ENSMUST00000147760
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001I_0001ENSG00000111701ENST00000229304ENST00000467171ENSG00000184344ENST00000329913CIL_00001I_0002ENSMUSG00000030117ENSMUST00000032211ENSMUSG00000040613ENSMUST00000112585ENSMUST00000112586ENSMUST00000112587ENSMUST00000143356
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111701 ENST00000229304 N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A N/A 0.741±0.06 N/A 0.058±0.02
ENST00000467171 N/A N/A N/A N/A 1.807±0.00 N/A N/A N/A 0.038±0.00 N/A N/A 0.576±0.00 N/A 0.081±0.00
ENSG00000184344 ENST00000329913 0.092±0.00 3.692±0.00 N/A N/A 0.042±0.00 0.092±0.00 0.072±0.04 0.041±0.00 N/A N/A 0.437±0.00 0.151±0.05 N/A 0.539±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030117 ENSMUST00000032211 0.161±0.12 0.061±0.04 0.017±0.01 0.008±0.00 0.069±0.04 0.091±0.03 0.043±0.00 0.022±0.01 0.588±0.64 0.035±0.01 0.020±0.00 0.153±0.16 0.042±0.02 0.042±0.02
ENSMUSG00000040613 ENSMUST00000112585 5.348±1.11 1.871±0.84 4.069±0.04 0.301±0.05 4.700±0.66 7.816±0.98 1.075±0.57 1.440±0.45 2.088±1.09 2.645±0.51 0.719±0.24 5.671±2.82 0.448±0.27 0.179±0.05
ENSMUST00000112586 3.236±0.40 1.510±0.76 N/A 0.125±0.00 4.042±1.38 1.712±0.24 0.762±0.00 0.678±0.31 1.173±0.66 1.413±0.22 N/A 3.746±1.61 0.128±0.07 0.166±0.06
ENSMUST00000112587 N/A N/A N/A N/A 4.872±0.00 2.714±1.46 0.424±0.00 N/A N/A N/A 0.129±0.00 3.663±0.00 0.883±0.00 0.029±0.00
ENSMUST00000143356 12.211±1.48 5.934±2.22 N/A N/A 15.251±1.64 N/A 2.552±0.80 3.466±0.65 4.644±1.62 4.821±0.58 0.721±0.06 13.943±3.60 0.492±0.25 0.482±0.27
ENSMUST00000147760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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