C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tropomyosin 3 pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330554 TPM3P8-001 ENSG00000183022 9606 - 2:230573167-230573809 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000330554
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000330554 0.041±0.00 0.023±0.00 0.022±0.00 0.046±0.00 0.160±0.14 0.060±0.00 0.023±0.00 0.455±0.00 0.119±0.00 0.032±0.00 0.015±0.00 0.014±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029549 Tpm3-003 protein_coding Mus_musculus 0 889
ENSMUST00000072359 Tpm3-rs7-201 protein_coding Mus_musculus 0 889
ENSMUST00000062193 Tpm3-201 protein_coding Mus_musculus 0 856
ENSMUST00000119570 Tpm3-001 protein_coding Mus_musculus 0 856
ENSMUST00000119158 Tpm3-005 protein_coding Mus_musculus 0 630
ENSMUST00000118566 Tpm3-004 protein_coding Mus_musculus 0 630
ENSMUST00000121503 Tpm3-002 protein_coding Mus_musculus 0 597
ENSMUST00000131354 Tpm3-006 retained_intron Mus_musculus 0 464
ENSMUST00000147430 Tpm3-011 retained_intron Mus_musculus 0 464
ENSMUST00000149432 Tpm3-007 protein_coding Mus_musculus 0 433
ENSMUST00000133281 Tpm3-010 retained_intron Mus_musculus 0 385
ENSMUST00000133361 Tpm3-013 retained_intron Mus_musculus 0 379
ENSMUST00000149115 Tpm3-009 retained_intron Mus_musculus 0 291
ENSMUST00000151798 Tpm3-012 retained_intron Mus_musculus 0 265
ENSMUST00000149734 Tpm3-014 retained_intron Mus_musculus 0 263
ENSMUST00000127955 Tpm3-008 protein_coding Mus_musculus 0 209
ENSMUST00000143281 Tpm3-015 retained_intron Mus_musculus 0 198

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