C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 173
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330794 TMEM173-001 ENSG00000184584 9606 - 5:139475964-139482790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000330794
Transcript ID Placenta
ENST00000330794 3.343±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000547 CIL_000547_0001 CGP 5:139448556-139482935
CIL_000548 CIL_000548_0001 CGP 5:139475534-139628433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002218 IMP activation of innate immune response
GO:0002230 IMP positive regulation of defense response to virus by host
GO:0005515 IPI protein binding
GO:0005741 IDA mitochondrial outer membrane
GO:0005777 IEA peroxisome
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0006915 IEA apoptotic process
GO:0008134 IDA transcription factor binding
GO:0016021 IEA integral component of membrane
GO:0019901 IDA protein kinase binding
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0031625 IEA ubiquitin protein ligase binding
GO:0032092 IDA positive regulation of protein binding
GO:0032479 TAS regulation of type I interferon production
GO:0032481 IEA:TAS positive regulation of type I interferon production
GO:0032608 IMP interferon-beta production
GO:0033160 IDA positive regulation of protein import into nucleus, translocation
GO:0035438 IDA cyclic-di-GMP binding
GO:0035458 IEA cellular response to interferon-beta
GO:0042802 IPI identical protein binding
GO:0042803 IDA protein homodimerization activity
GO:0042993 IDA positive regulation of transcription factor import into nucleus
GO:0045087 IMP innate immune response
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048471 ISS perinuclear region of cytoplasm
GO:0051607 IDA defense response to virus
GO:0061507 ISS cyclic-GMP-AMP binding
GO:0071360 IMP cellular response to exogenous dsRNA

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115728 Tmem173-201 protein_coding Mus_musculus 0 686

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