C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330838 ANKRD17-002 ENSG00000132466 9606 - 4:73075686-73258798 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330838
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330838 4.057±0.00 3.301±0.00 1.688±0.00 3.925±0.00 3.873±0.00 6.013±1.83 2.739±0.00 3.793±0.00 2.875±0.86 2.785±0.79 2.112±0.42 3.132±1.11 1.366±0.06 2.946±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000D1 CIL_0000D1_0001 CGP 4:73056080-73258798

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0016020 IDA membrane
GO:0016032 IEA viral process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081914 Ankrd17-202 protein_coding Mus_musculus 0 11030
ENSMUST00000014421 Ankrd17-201 protein_coding Mus_musculus 0 7740
ENSMUST00000168058 Ankrd17-203 protein_coding Mus_musculus 0 3299

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