C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synovial sarcoma translocation gene on chromosome 18-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331758 SS18L1-003 ENSG00000184402 9606 + 20:62143795-62182484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000331758
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000331758 0.910±0.00 0.790±0.00 3.333±1.42 1.176±0.79 0.817±0.16 0.868±0.79 1.156±0.26 0.702±0.00 1.020±0.00 2.433±0.45 0.640±0.30 1.528±1.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000134 CIL_000134_0001 CGP 20:62136735-62182484
CIL_0001DM CIL_0001DM_0001 CGP 20:62143795-62203568

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041126 Ss18l1-001 protein_coding Mus_musculus 0 1441

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