C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synovial sarcoma translocation gene on chromosome 18-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184402 SS18L1 9606 + 20:62143795-62182484 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331758 SS18L1-003 62143795-62182484 protein_coding
  ENST00000370848 SS18L1-201 62161418-62180280 protein_coding
  ENST00000450482 SS18L1-004 62143795-62161580 protein_coding
  ENST00000491916 SS18L1-002 62162548-62163529 processed_transcript
  ENST00000492466 SS18L1-001 62163458-62180284 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000331758ENST00000370848ENST00000492466
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000331758 0.910±0.00 0.790±0.00 3.333±1.42 1.176±0.79 0.817±0.16 0.868±0.79 1.156±0.26 0.702±0.00 1.020±0.00 2.433±0.45 0.640±0.30 1.528±1.07
ENST00000370848 N/A N/A 1.412±0.00 N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A N/A
ENST00000492466 N/A N/A N/A N/A N/A N/A N/A 1.323±0.00 3.109±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000134 CIL_000134_0001 CGP 20:62136735-62182484
CIL_0001DM CIL_0001DM_0001 CGP 20:62143795-62203568

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000039086 Ss18l1 synovial sarcoma translocation gene on chromosome 18-like 1 protein_coding Mus_musculus

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