C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAD2 mitotic arrest deficient-like 1 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333047 MAD2L1-004 ENSG00000164109 9606 - 4:120059437-120066833 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333047
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333047 0.446±0.00 1.371±0.00 1.908±0.00 0.893±0.21 1.208±0.00 0.491±0.28 0.513±0.00 0.122±0.00 1.209±0.00 0.144±0.00 6.923±4.86 3.109±1.12 7.783±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YP CIL_0006YP_0002 CGP 4:119494395-120067074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000776 IDA kinetochore
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005643 IDA nuclear pore
GO:0005829 IDA cytosol
GO:0007093 IGI mitotic cell cycle checkpoint
GO:0007094 TAS mitotic spindle assembly checkpoint
GO:0031145 TAS anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0042177 IDA negative regulation of protein catabolic process
GO:0042802 IPI identical protein binding
GO:0042803 IPI protein homodimerization activity
GO:0043066 IMP negative regulation of apoptotic process
GO:0045930 IMP negative regulation of mitotic cell cycle
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051436 TAS negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051439 TAS regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0060564 IDA negative regulation of mitotic anaphase-promoting complex activity
GO:0072686 IDA mitotic spindle
GO:0090267 IMP positive regulation of mitotic cell cycle spindle assembly checkpoint

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101343 Mad2l1-002 protein_coding Mus_musculus 0 374
ENSMUST00000125430 Mad2l1-003 retained_intron Mus_musculus 0 339
ENSMUST00000116605 Mad2l1-001 protein_coding Mus_musculus 0 339

Loading