C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU class 6 homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333640 POU6F1-002 ENSG00000184271 9606 - 12:51189161-51198167 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333640
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333640 4.595±0.00 2.166±0.00 3.363±0.69 2.502±0.00 2.780±2.55 0.781±0.00 2.167±0.00 0.151±0.00 2.494±2.13 3.046±0.00 2.686±2.58 0.932±0.27 1.003±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033K CIL_00033K_0002 CGP 12:51093663-51217693
CIL_00033P CIL_00033P_0002 CGP 12:51186936-51271362

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007420 TAS brain development
GO:0007507 TAS heart development
GO:0007517 TAS muscle organ development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073837 Pou6f1-001 protein_coding Mus_musculus 0 1605
ENSMUST00000177202 Pou6f1-002 nonsense_mediated_decay Mus_musculus 0 1526
ENSMUST00000176271 Pou6f1-005 retained_intron Mus_musculus 0 1279
ENSMUST00000176140 Pou6f1-004 nonsense_mediated_decay Mus_musculus 0 1279
ENSMUST00000176492 Pou6f1-006 retained_intron Mus_musculus 0 1258
ENSMUST00000058274 Pou6f1-201 protein_coding Mus_musculus 0 1199
ENSMUST00000176300 Pou6f1-003 nonsense_mediated_decay Mus_musculus 0 1199
ENSMUST00000184908 Pou6f1-202 protein_coding Mus_musculus 0 1070
ENSMUST00000177335 Pou6f1-007 retained_intron Mus_musculus 0 723

Loading