C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane protein 216
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123788 Tmem216-005 ENSMUSG00000024667 10090 - 19:10539403-10555751 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryENSMUST00000123788
Transcript ID Liver Ovary
ENSMUST00000123788 6.571±0.00 13.209±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0002 VISTA 19:10121785-10724671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005929 ISS cilium
GO:0016021 IEA integral component of membrane
GO:0035869 IMP ciliary transition zone
GO:0036038 IDA TCTN-B9D complex
GO:0042384 ISS cilium assembly
GO:0060271 IMP cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334888 TMEM216-201 protein_coding Homo_sapiens 0 490
ENST00000340437 CPSF7-001 protein_coding Homo_sapiens 0 259
ENST00000394888 CPSF7-006 protein_coding Homo_sapiens 0 259
ENST00000398979 TMEM216-004 protein_coding Homo_sapiens 0 424
ENST00000439958 CPSF7-005 protein_coding Homo_sapiens 0 259
ENST00000448745 CPSF7-007 protein_coding Homo_sapiens 0 259
ENST00000477890 CPSF7-027 protein_coding Homo_sapiens 0 259
ENST00000515837 TMEM216-001 protein_coding Homo_sapiens 0 459
ENST00000537641 CPSF7-018 retained_intron Homo_sapiens 0 259
ENST00000544795 TMEM216-003 retained_intron Homo_sapiens 0 243

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