C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: two pore segment channel 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000335509 TPCN1-001 ENSG00000186815 9606 + 12:113221438-113298585 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000335509
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000335509 4.753±0.00 3.001±0.00 3.226±1.94 5.847±0.00 5.083±0.00 8.594±7.35 5.082±0.00 4.509±0.00 2.643±0.00 1.902±0.00 6.167±2.57 7.626±0.15 11.638±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078D CIL_00078D_0002 CGP 12:113195441-113298585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005245 IEA:IBA voltage-gated calcium channel activity
GO:0005515 IPI protein binding
GO:0005765 IDA lysosomal membrane
GO:0005886 IBA plasma membrane
GO:0006811 IEA ion transport
GO:0006816 IBA calcium ion transport
GO:0010008 IDA endosome membrane
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034220 IBA ion transmembrane transport
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042802 IPI identical protein binding
GO:0055085 TAS:IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport
GO:0072345 IDA NAADP-sensitive calcium-release channel activity
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046426 Tpcn1-201 protein_coding Mus_musculus 0 2876

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