C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336095 RNF24-001 ENSG00000101236 9606 - 20:3927309-4015389 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000336095
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000336095 6.639±0.00 1.133±0.00 2.072±0.00 1.018±0.00 3.593±0.00 4.467±0.00 1.129±0.37 4.018±2.22 1.829±0.14 3.581±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067O CIL_00067O_0002 CGP 20:3846799-3929882
CIL_0004LL CIL_0004LL_0001 CGP 20:3888839-4015582
CIL_00068E CIL_00068E_0002 CGP 20:3927309-4187747

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110194 Rnf24-003 protein_coding Mus_musculus 0 848
ENSMUST00000165420 Rnf24-201 protein_coding Mus_musculus 0 846
ENSMUST00000059372 Rnf24-001 protein_coding Mus_musculus 0 845
ENSMUST00000183902 Rnf24-002 nonsense_mediated_decay Mus_musculus 0 370
ENSMUST00000142982 Rnf24-004 retained_intron Mus_musculus 0 243

Loading