C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibrinogen gamma chain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336098 FGG-002 ENSG00000171557 9606 - 4:154604576-154612648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartKidneyLungOvaryPlacentaTestisENST00000336098
Transcript ID Adrenal Heart Kidney Lung Ovary Placenta Testis
ENST00000336098 0.048±0.00 0.137±0.00 4.963±0.00 21.250±0.00 0.685±0.00 0.857±0.20 0.284±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D1 CIL_0008D1_0001 VISTA 4:154359551-154960904

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002576 TAS platelet degranulation
GO:0005102 IEA:IPI receptor binding
GO:0005198 IDA structural molecule activity
GO:0005576 TAS extracellular region
GO:0005577 IEA:IDA fibrinogen complex
GO:0005615 IDA extracellular space
GO:0005737 IEA cytoplasm
GO:0005886 TAS plasma membrane
GO:0005938 IEA cell cortex
GO:0007160 IDA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0007596 TAS blood coagulation
GO:0009897 IDA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0030168 IEA:TAS platelet activation
GO:0030198 TAS extracellular matrix organization
GO:0030674 IEA protein binding, bridging
GO:0031091 IDA platelet alpha granule
GO:0031093 TAS platelet alpha granule lumen
GO:0034116 IDA positive regulation of heterotypic cell-cell adhesion
GO:0043623 IDA cellular protein complex assembly
GO:0045907 IDA positive regulation of vasoconstriction
GO:0045921 IDA positive regulation of exocytosis
GO:0046872 IEA metal ion binding
GO:0050714 IDA positive regulation of protein secretion
GO:0050839 IPI cell adhesion molecule binding
GO:0051258 IEA:IMP protein polymerization
GO:0051592 IDA response to calcium ion
GO:0070062 IDA extracellular vesicular exosome
GO:0070374 IDA positive regulation of ERK1 and ERK2 cascade
GO:0070527 IDA platelet aggregation
GO:0072562 IDA blood microparticle
GO:0090277 IDA positive regulation of peptide hormone secretion
GO:1900026 NAS positive regulation of substrate adhesion-dependent cell spreading
GO:1902042 IDA negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2000352 IDA negative regulation of endothelial cell apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048486 Fgg-201 protein_coding Mus_musculus 0 1203

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