C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerophosphodiester phosphodiesterase domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336898 GDPD5-001 ENSG00000158555 9606 - 11:75434640-75525903 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000336898
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000336898 4.297±0.00 2.277±0.00 0.106±0.00 1.922±0.00 20.190±0.00 1.135±0.00 0.492±0.29 0.459±0.00 1.080±0.00 2.518±0.00 3.105±1.08 4.861±2.11 5.434±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NG CIL_0008NG_0001 VISTA 11:75253021-75855707
CIL_0001SV CIL_0001SV_0002 CGP 11:75434640-75572783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0006071 IEA glycerol metabolic process
GO:0006629 IEA lipid metabolic process
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0008889 IEA glycerophosphodiester phosphodiesterase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0021522 IEA spinal cord motor neuron differentiation
GO:0021895 IEA cerebral cortex neuron differentiation
GO:0031175 IEA neuron projection development
GO:0042995 IEA cell projection
GO:0045666 IEA positive regulation of neuron differentiation
GO:0045746 IEA negative regulation of Notch signaling pathway
GO:0048505 IEA regulation of timing of cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037528 Gdpd5-201 protein_coding Mus_musculus 0 2250
ENSDART00000111234 gdpd5a-201 protein_coding Danio_rerio 1e-27 130
ENSDART00000141260 gdpd5a-002 protein_coding Danio_rerio 1e-27 130

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