C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: parvin, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338758 PARVB-002 ENSG00000188677 9606 + 22:44024277-44172949 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000338758
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000338758 4.224±0.00 5.411±0.00 0.240±0.00 3.072±1.45 3.410±0.00 1.699±1.54 7.240±6.07 0.589±0.13 1.572±0.00 23.967±0.00 2.755±1.36 1.892±0.56 1.640±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HG CIL_0008HG_0001 VISTA 22:43702370-44303917
CIL_0004UY CIL_0004UY_0001 CGP 22:43923739-44010531
CIL_0006F0 CIL_0006F0_0001 CGP 22:43955421-44172949
CIL_0000V6 CIL_0000V6_0002 CGP 22:43999211-44219533

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005925 IDA focal adhesion
GO:0007155 IEA cell adhesion
GO:0030027 IDA lamellipodium
GO:0030031 IMP cell projection assembly
GO:0030032 IMP lamellipodium assembly
GO:0031532 IMP actin cytoskeleton reorganization
GO:0034329 TAS cell junction assembly
GO:0071963 IMP establishment or maintenance of cell polarity regulating cell shape

Homologs

No Homologs available.

Loading