C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of G-protein signaling 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338806 RGS12-003 ENSG00000159788 9606 + 4:3369879-3439905 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainOvaryENST00000338806
Transcript ID Bladder Brain Ovary
ENST00000338806 0.499±0.00 0.811±0.00 0.297±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Z3 CIL_0003Z3_0001 CGP 4:3244369-3439913
CIL_0001XB CIL_0001XB_0001 CGP 4:3293028-3449495

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000794 TAS condensed nuclear chromosome
GO:0005057 IEA receptor signaling protein activity
GO:0005096 IBA GTPase activator activity
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IBA cytoplasm
GO:0005886 IBA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0007165 IEA signal transduction
GO:0008277 TAS:IEA regulation of G-protein coupled receptor protein signaling pathway
GO:0030695 IDA:IEA GTPase regulator activity
GO:0035556 IEA intracellular signal transduction
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IBA positive regulation of GTPase activity
GO:0050790 IDA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114284 Rgs12-003 protein_coding Mus_musculus 0 2073
ENSMUST00000114285 Rgs12-008 protein_coding Mus_musculus 0 2037
ENSMUST00000114283 Rgs12-006 protein_coding Mus_musculus 0 1930
ENSMUST00000114281 Rgs12-002 protein_coding Mus_musculus 0 1930
ENSMUST00000087684 Rgs12-005 protein_coding Mus_musculus 0 1929
ENSMUST00000030984 Rgs12-001 protein_coding Mus_musculus 0 1929
ENSMUST00000114280 Rgs12-007 protein_coding Mus_musculus 0 1498
ENSMUST00000156339 Rgs12-015 protein_coding Mus_musculus 0 867
ENSMUST00000155162 Rgs12-012 processed_transcript Mus_musculus 0 580
ENSMUST00000156819 Rgs12-013 protein_coding Mus_musculus 0 520
ENSMUST00000141562 Rgs12-010 retained_intron Mus_musculus 0 364
ENSMUST00000128161 Rgs12-004 retained_intron Mus_musculus 0 244
ENSMUST00000153972 Rgs12-009 processed_transcript Mus_musculus 0 230

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