C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 9, Y-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338981 USP9Y-001 ENSG00000114374 9606 + Y:12701231-12860839 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverMusclePlacentaENST00000338981
Transcript ID Bladder Breast Colon Kidney Liver Muscle Placenta
ENST00000338981 0.979±0.00 0.020±0.00 0.940±0.00 0.397±0.00 0.837±0.00 0.165±0.00 0.081±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 TAS ubiquitin-specific protease activity
GO:0005488 IEA binding
GO:0005737 ISS cytoplasm
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007179 ISS transforming growth factor beta receptor signaling pathway
GO:0007283 TAS spermatogenesis
GO:0008234 TAS cysteine-type peptidase activity
GO:0016579 ISS protein deubiquitination
GO:0030509 ISS BMP signaling pathway
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0070410 ISS co-SMAD binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089302 Usp9x-001 protein_coding Mus_musculus 0 9031
ENSMUST00000091188 Usp9y-001 protein_coding Mus_musculus 0 7954
ENSMUST00000169594 Usp9x-002 protein_coding Mus_musculus 0 2700
ENSMUST00000139764 Usp9x-004 retained_intron Mus_musculus 0 2244
ENSMUST00000133997 Usp9x-005 protein_coding Mus_musculus 0 1005
ENSMUST00000174762 Usp9x-006 retained_intron Mus_musculus 0 693
ENSMUST00000124097 Usp9x-003 retained_intron Mus_musculus 0 616
ENSMUST00000149021 Usp9x-007 protein_coding Mus_musculus 0 547
ENSMUST00000168236 Gm17538-201 processed_pseudogene Mus_musculus 0 399

Loading