C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340829 CDK13-002 ENSG00000065883 9606 + 7:39950510-40095555 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340829
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340829 2.917±0.00 2.807±0.00 1.978±0.00 1.636±0.50 2.390±0.17 2.811±0.32 3.187±0.00 3.782±1.52 1.765±0.40 1.901±0.27 2.540±1.67 3.836±0.87 3.054±0.26 8.677±1.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000380 ISS alternative mRNA splicing, via spliceosome
GO:0002945 IPI cyclin K-CDK13 complex
GO:0004672 TAS:IEA protein kinase activity
GO:0004693 IEA cyclin-dependent protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005615 IDA extracellular space
GO:0006468 IEA protein phosphorylation
GO:0007088 TAS regulation of mitosis
GO:0007275 TAS multicellular organismal development
GO:0008284 TAS positive regulation of cell proliferation
GO:0008353 IDA RNA polymerase II carboxy-terminal domain kinase activity
GO:0016032 IEA viral process
GO:0016607 IDA nuclear speck
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0019908 ISS nuclear cyclin-dependent protein kinase holoenzyme complex
GO:0030097 IMP hemopoiesis
GO:0030332 IPI cyclin binding
GO:0044822 IDA poly(A) RNA binding
GO:0070816 IDA phosphorylation of RNA polymerase II C-terminal domain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042365 Cdk13-201 protein_coding Mus_musculus 0 4787

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