C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poliovirus receptor-related 1 (herpesvirus entry mediator C)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340882 PVRL1-003 ENSG00000110400 9606 - 11:119674592-119728553 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverOvaryENST00000340882
Transcript ID Kidney Liver Ovary
ENST00000340882 1.190±0.00 1.761±0.00 1.930±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099Y CIL_00099Y_0001 VISTA 11:119589021-120192949

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001618 IEA virus receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0005912 NAS adherens junction
GO:0005913 IDA cell-cell adherens junction
GO:0006955 NAS immune response
GO:0007155 NAS cell adhesion
GO:0007156 ISS homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007165 TAS signal transduction
GO:0009615 IEA response to virus
GO:0015026 TAS coreceptor activity
GO:0016020 TAS membrane
GO:0016021 NAS integral component of membrane
GO:0016337 NAS single organismal cell-cell adhesion
GO:0034329 TAS cell junction assembly
GO:0034332 TAS adherens junction organization
GO:0042803 ISS protein homodimerization activity
GO:0045216 TAS cell-cell junction organization
GO:0046718 NAS viral entry into host cell
GO:0050839 IPI cell adhesion molecule binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034510 Pvrl1-201 protein_coding Mus_musculus 0 1288

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