C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH2B adaptor protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341259 SH2B3-001 ENSG00000111252 9606 + 12:111405948-111451623 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341259
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341259 10.846±0.00 6.949±0.00 1.190±0.73 8.703±0.00 2.597±0.00 7.256±5.58 4.888±0.00 3.092±0.63 9.404±7.76 2.392±0.46 5.595±3.69 4.083±0.87 6.141±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0001 VISTA 12:110911282-111513646

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0007596 TAS blood coagulation
GO:0030097 IEA hemopoiesis
GO:0030154 IEA cell differentiation
GO:0032403 IEA protein complex binding
GO:0035162 IEA embryonic hemopoiesis
GO:0035556 IEA intracellular signal transduction
GO:0042301 IEA phosphate ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040308 Sh2b3-002 protein_coding Mus_musculus 0 835
ENSMUST00000122426 Sh2b3-005 protein_coding Mus_musculus 0 835
ENSMUST00000086310 Sh2b3-001 protein_coding Mus_musculus 0 835
ENSMUST00000136960 Sh2b3-003 nonsense_mediated_decay Mus_musculus 0 514
ENSMUST00000118580 Sh2b3-004 protein_coding Mus_musculus 0 484
ENSMUST00000137682 Sh2b3-006 protein_coding Mus_musculus 0 207

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