C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341469 TRIM14-001 ENSG00000106785 9606 - 9:98084355-98119198 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341469
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341469 1.788±0.00 3.552±0.00 1.694±0.00 1.295±0.43 1.241±0.13 3.361±1.04 0.363±0.00 4.153±1.34 4.307±2.65 3.169±0.35 0.062±0.00 5.144±3.32 3.886±0.09 1.727±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AQ CIL_0009AQ_0001 VISTA 9:97562581-98164397
CIL_000853 CIL_000853_0001 VISTA 9:97573936-98178227
CIL_0009AR CIL_0009AR_0001 VISTA 9:97573936-98175680
CIL_00029Q CIL_00029Q_0001 CGP 9:97983361-98083075
CIL_00029N CIL_00029N_0001 CGP 9:98056739-98119212
CIL_00029O CIL_00029O_0001 CGP 9:98069275-98192640

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0032897 IDA negative regulation of viral transcription
GO:0045087 IDA innate immune response
GO:0051091 IDA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 IDA positive regulation of NF-kappaB transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046897 Trim14-001 protein_coding Mus_musculus 0 1125

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