C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: late endosomal/lysosomal adaptor, MAPK and MTOR activator 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341942 LAMTOR4-001 ENSG00000188186 9606 + 7:100148907-100154203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341942
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341942 61.448±0.00 153.944±0.00 14.697±0.00 53.310±1.24 53.252±32.54 67.327±39.57 22.773±11.86 50.958±29.45 16.283±2.33 51.744±36.83 32.496±0.66 120.478±73.82 111.059±21.01 67.349±12.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0002JK CIL_0002JK_0001 CGP 7:100148907-100158715

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IDA guanyl-nucleotide exchange factor activity
GO:0005764 IDA lysosome
GO:0008361 IMP regulation of cell size
GO:0032008 IMP positive regulation of TOR signaling
GO:0032947 IDA protein complex scaffold
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043547 IDA positive regulation of GTPase activity
GO:0061462 IMP protein localization to lysosome
GO:0071230 IMP cellular response to amino acid stimulus
GO:0071986 IDA Ragulator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062067 Lamtor4-001 protein_coding Mus_musculus 0 424
ENSMUST00000160157 Lamtor4-002 processed_transcript Mus_musculus 0 388

Loading