C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM homeobox transcription factor 1, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342310 LMX1A-001 ENSG00000162761 9606 - 1:165201867-165356715 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000342310
Transcript ID Muscle Testis
ENST00000342310 0.082±0.00 0.243±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001558 IEA regulation of cell growth
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007411 IEA axon guidance
GO:0007417 IEA central nervous system development
GO:0007420 IEA brain development
GO:0008270 IEA zinc ion binding
GO:0010468 IEA regulation of gene expression
GO:0021542 IEA dentate gyrus development
GO:0021549 IEA cerebellum development
GO:0021766 IEA hippocampus development
GO:0021953 IEA central nervous system neuron differentiation
GO:0030182 IEA neuron differentiation
GO:0030901 IEA midbrain development
GO:0043565 IEA sequence-specific DNA binding
GO:0045665 IEA negative regulation of neuron differentiation
GO:0071542 IEA dopaminergic neuron differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028003 Lmx1a-001 protein_coding Mus_musculus 0 2294
ENSMUST00000111377 Lmx1a-002 protein_coding Mus_musculus 0 2292

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