C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 1 receptor accessory protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342550 IL1RAP-009 ENSG00000196083 9606 + 3:190514102-190651512 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyMuscleENST00000342550
Transcript ID Bladder Colon Kidney Muscle
ENST00000342550 0.584±0.00 0.290±0.00 0.172±0.00 0.170±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DL CIL_0000DL_0001 CGP 3:190428655-190659750
CIL_0000DM CIL_0000DM_0001 CGP 3:190514051-190892429

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 TAS signal transducer activity
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006461 TAS protein complex assembly
GO:0006954 TAS inflammatory response
GO:0006955 TAS immune response
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174171 Il1rap-006 nonsense_mediated_decay Mus_musculus 0 1783
ENSMUST00000023156 Il1rap-004 protein_coding Mus_musculus 0 907

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