C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 17 open reading frame 62
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342572 C17orf62-003 ENSG00000178927 9606 - 17:82442589-82450770 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastPlacentaENST00000342572
Transcript ID Breast Placenta
ENST00000342572 2.653±0.00 17.271±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054N CIL_00054N_0001 CGP 17:82389223-82442645
CIL_00054K CIL_00054K_0001 CGP 17:82418318-82450829
CIL_00043T CIL_00043T_0002 CGP 17:82442589-82490537

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149351 BC017643-006 retained_intron Mus_musculus 0 368
ENSMUST00000133535 BC017643-007 retained_intron Mus_musculus 0 368
ENSMUST00000038709 BC017643-001 protein_coding Mus_musculus 0 368
ENSMUST00000106115 BC017643-003 protein_coding Mus_musculus 0 368
ENSMUST00000137299 BC017643-004 protein_coding Mus_musculus 0 257
ENSMUST00000169393 BC017643-008 protein_coding Mus_musculus 0 217
ENSMUST00000147490 BC017643-002 protein_coding Mus_musculus 4.06377e-44 183

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