C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alkB, alkylation repair homolog 2 (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343075 ALKBH2-001 ENSG00000189046 9606 - 12:109088189-109093472 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343075
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343075 4.785±0.00 5.367±0.00 1.391±0.00 4.136±1.49 2.187±0.81 1.863±1.52 0.928±0.43 2.339±1.59 5.841±0.00 3.980±0.00 4.102±1.53 4.413±0.81 2.017±0.35 5.281±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VU CIL_0001VU_0001 CGP 12:109023089-109093631
CIL_0001VT CIL_0001VT_0001 CGP 12:109088188-109110992

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005654 TAS nucleoplasm
GO:0006281 TAS DNA repair
GO:0006307 IDA DNA dealkylation involved in DNA repair
GO:0008198 IDA ferrous iron binding
GO:0016491 IEA oxidoreductase activity
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0035511 IDA oxidative DNA demethylation
GO:0043734 IDA DNA-N1-methyladenine dioxygenase activity
GO:0051747 IDA cytosine C-5 DNA demethylase activity
GO:0055114 IEA oxidation-reduction process
GO:0070989 TAS oxidative demethylation
GO:0080111 TAS DNA demethylation

Homologs

No Homologs available.

Loading