C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134159 Zcchc17-001 ENSMUSG00000028772 10090 - 4:130315383-130359943 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000134159
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000134159 7.548±0.91 14.565±4.59 4.656±0.94 11.263±3.34 6.391±2.73 8.743±0.82 7.183±0.21 7.387±4.46 6.761±1.99 12.665±0.52 7.943±3.54 13.819±3.21 3.638±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002A6 CIL_0002A6_0002 CGP 4:130315383-130390026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 TAS RNA binding
GO:0005730 IDA nucleolus
GO:0008270 IEA zinc ion binding
GO:0022625 IDA cytosolic large ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344147 ZCCHC17-001 protein_coding Homo_sapiens 0 1022
ENST00000373714 ZCCHC17-002 protein_coding Homo_sapiens 0 1020
ENST00000422613 ZCCHC17-201 protein_coding Homo_sapiens 0 1014
ENST00000479629 ZCCHC17-004 processed_transcript Homo_sapiens 0 649
ENST00000490049 ZCCHC17-003 processed_transcript Homo_sapiens 0 412
ENST00000546109 ZCCHC17-202 protein_coding Homo_sapiens 0 867
ENST00000615916 ZCCHC17-203 protein_coding Homo_sapiens 0 869
ENST00000616393 ZCCHC17-204 protein_coding Homo_sapiens 0 621
ENST00000616859 ZCCHC17-205 protein_coding Homo_sapiens 0 387
ENST00000618216 ZCCHC17-206 protein_coding Homo_sapiens 0 686

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