C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell division cycle 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344548 CDC42-001 ENSG00000070831 9606 + 1:22052668-22092946 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryENST00000344548
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary
ENST00000344548 17.069±0.00 14.966±0.00 13.134±3.46 18.545±0.87 24.429±0.00 8.674±0.36 4.189±0.00 25.112±0.00 5.347±0.00 38.929±26.39

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 ISS Golgi membrane
GO:0003924 TAS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006184 TAS:IEA GTP catabolic process
GO:0007030 ISS Golgi organization
GO:0007163 TAS establishment or maintenance of cell polarity
GO:0007165 IEA signal transduction
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007264 IEA:TAS small GTPase mediated signal transduction
GO:0007411 TAS axon guidance
GO:0007596 TAS blood coagulation
GO:0015031 IEA protein transport
GO:0016020 IDA:IEA membrane
GO:0019901 IDA protein kinase binding
GO:0021762 IEP substantia nigra development
GO:0030036 IDA actin cytoskeleton organization
GO:0030175 IDA filopodium
GO:0030225 TAS macrophage differentiation
GO:0030496 IDA midbody
GO:0031274 IDA positive regulation of pseudopodium assembly
GO:0031295 TAS T cell costimulation
GO:0031333 IPI negative regulation of protein complex assembly
GO:0031996 IPI thioesterase binding
GO:0032467 IMP positive regulation of cytokinesis
GO:0034191 IPI apolipoprotein A-I receptor binding
GO:0036464 IDA cytoplasmic ribonucleoprotein granule
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042059 TAS negative regulation of epidermal growth factor receptor signaling pathway
GO:0042692 TAS muscle cell differentiation
GO:0042802 IPI identical protein binding
GO:0043005 IDA neuron projection
GO:0043025 IDA neuronal cell body
GO:0045087 TAS innate immune response
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0051149 TAS positive regulation of muscle cell differentiation
GO:0051233 IDA spindle midzone
GO:0051489 IDA regulation of filopodium assembly
GO:0051683 ISS establishment of Golgi localization
GO:0051988 IMP regulation of attachment of spindle microtubules to kinetochore
GO:0070062 IDA extracellular vesicular exosome
GO:0072384 ISS organelle transport along microtubule
GO:0072686 IDA mitotic spindle
GO:1900026 IDA positive regulation of substrate adhesion-dependent cell spreading

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051477 Cdc42-001 protein_coding Mus_musculus 0 1917
ENSMUST00000030417 Cdc42-002 protein_coding Mus_musculus 0 865
ENSMUST00000117665 Gm12492-001 processed_pseudogene Mus_musculus 0 676
ENSDART00000142546 cdc42l2-001 protein_coding Danio_rerio 8e-32 143

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