C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coagulation factor VII (serum prothrombin conversion accelerator)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000346342 F7-002 ENSG00000057593 9606 + 13:113105791-113120031 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000346342
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000346342 0.206±0.00 0.197±0.00 0.248±0.06 0.074±0.01 0.028±0.00 0.034±0.01 31.529±0.00 58.651±0.00 0.039±0.00 1.027±1.39 0.181±0.12 1.016±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RV CIL_0000RV_0001 CGP 13:112894378-113120681
CIL_00017F CIL_00017F_0001 CGP 13:113105788-113149529

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001948 IPI glycoprotein binding
GO:0002690 IDA positive regulation of leukocyte chemotaxis
GO:0003824 IEA catalytic activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005576 TAS:IEA extracellular region
GO:0005788 TAS endoplasmic reticulum lumen
GO:0005796 TAS Golgi lumen
GO:0005886 TAS plasma membrane
GO:0006508 TAS:IEA proteolysis
GO:0007596 TAS:IEA blood coagulation
GO:0007598 TAS blood coagulation, extrinsic pathway
GO:0008236 TAS serine-type peptidase activity
GO:0010641 IDA positive regulation of platelet-derived growth factor receptor signaling pathway
GO:0017187 TAS peptidyl-glutamic acid carboxylation
GO:0030335 TAS positive regulation of cell migration
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0050927 IDA positive regulation of positive chemotaxis
GO:0051897 IDA positive regulation of protein kinase B signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033820 F7-001 protein_coding Mus_musculus 0 841

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