C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldehyde dehydrogenase 1 family, member A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000347587 ALDH1A2-002 ENSG00000128918 9606 - 15:57953431-58065738 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyOvaryPlacentaTestisENST00000347587
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Ovary Placenta Testis
ENST00000347587 1.899±0.00 0.807±0.00 0.311±0.00 0.995±0.00 2.035±0.00 1.919±0.00 1.326±1.07 4.837±2.85 26.097±15.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000501 CIL_000501_0002 CGP 15:57953424-58497866

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001758 ISS retinal dehydrogenase activity
GO:0004028 ISS 3-chloroallyl aldehyde dehydrogenase activity
GO:0005737 IDA cytoplasm
GO:0006776 NAS vitamin A metabolic process
GO:0008152 IEA metabolic process
GO:0008285 IDA negative regulation of cell proliferation
GO:0016491 IEA oxidoreductase activity
GO:0016918 ISS retinal binding
GO:0021915 IMP neural tube development
GO:0034097 IDA response to cytokine
GO:0042572 IEA retinol metabolic process
GO:0042573 ISS retinoic acid metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034723 Aldh1a2-001 protein_coding Mus_musculus 0 1009

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