C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily C, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000348423 TRPC6-002 ENSG00000137672 9606 - 11:101452955-101583503 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverLungOvaryPlacentaTestisENST00000348423
Transcript ID Brain Kidney Liver Lung Ovary Placenta Testis
ENST00000348423 0.164±0.00 0.613±0.00 0.013±0.00 1.901±0.00 0.226±0.00 1.308±0.00 0.413±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C4 CIL_0002C4_0002 CGP 11:101451564-101916522

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005886 IDA plasma membrane
GO:0006811 IEA ion transport
GO:0006812 TAS cation transport
GO:0007411 TAS axon guidance
GO:0007596 TAS blood coagulation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030168 TAS platelet activation
GO:0032414 IDA positive regulation of ion transmembrane transporter activity
GO:0034220 TAS ion transmembrane transport
GO:0051928 IDA positive regulation of calcium ion transport
GO:0055085 TAS:IEA transmembrane transport
GO:0070588 TAS calcium ion transmembrane transport
GO:0070679 IDA inositol 1,4,5 trisphosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050433 Trpc6-201 protein_coding Mus_musculus 0 1921

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