C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytokine inducible SH2-containing protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000348721 CISH-001 ENSG00000114737 9606 - 3:50606522-50611831 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000348721
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000348721 16.558±0.00 7.384±0.00 2.097±0.00 1.692±0.00 3.638±1.86 2.468±0.62 15.760±13.29 11.350±10.52 15.452±13.50 8.823±5.93 10.350±7.22 16.927±6.12 3.929±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0001 VISTA 3:50299047-50902727

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001558 NAS regulation of cell growth
GO:0003674 ND molecular_function
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005829 TAS cytosol
GO:0009968 IEA negative regulation of signal transduction
GO:0016567 IEA protein ubiquitination
GO:0035556 NAS:IEA intracellular signal transduction
GO:0060397 TAS JAK-STAT cascade involved in growth hormone signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085102 Cish-001 protein_coding Mus_musculus 0 1092
ENSMUST00000165664 Cish-003 processed_transcript Mus_musculus 0 1029
ENSMUST00000168260 Cish-002 protein_coding Mus_musculus 0 798

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