C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | phosphodiesterase 9A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000349112  |
PDE9A-004 |
ENSG00000160191 |
9606 | + |
21:42653813-42775509  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008QJ | CIL_0008QJ_0001 | VISTA | 21:42290762-42894212 |
| CIL_0001JT | CIL_0001JT_0001 | CGP | 21:42496008-42775509 |
| CIL_0001D2 | CIL_0001D2_0002 | CGP | 21:42653636-42879568 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004114 | TAS:IEA | 3',5'-cyclic-nucleotide phosphodiesterase activity |
| GO:0005515 | IPI | protein binding |
| GO:0005783 | IEA | endoplasmic reticulum |
| GO:0005794 | IEA | Golgi apparatus |
| GO:0005829 | IDA | cytosol |
| GO:0005886 | IEA | plasma membrane |
| GO:0007165 | TAS:IEA | signal transduction |
| GO:0007596 | TAS | blood coagulation |
| GO:0008152 | IEA | metabolic process |
| GO:0042995 | IEA | cell projection |
| GO:0046872 | IEA | metal ion binding |
| GO:0047555 | IEA | 3',5'-cyclic-GMP phosphodiesterase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000131417
|
Pde9a-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1493 |
|
ENSMUST00000137927
|
Pde9a-005 | nonsense_mediated_decay | Mus_musculus | 0 | 1452 |
|
ENSMUST00000127929
|
Pde9a-002 | protein_coding | Mus_musculus | 0 | 1452 |
|
ENSMUST00000134525
|
Pde9a-006 | protein_coding | Mus_musculus | 0 | 1452 |
|
ENSMUST00000143549
|
Pde9a-003 | nonsense_mediated_decay | Mus_musculus | 0 | 1452 |
|
ENSMUST00000047168
|
Pde9a-001 | protein_coding | Mus_musculus | 0 | 1452 |
|
ENSMUST00000124902
|
Pde9a-008 | nonsense_mediated_decay | Mus_musculus | 0 | 797 |
|
ENSMUST00000154567
|
Pde9a-007 | retained_intron | Mus_musculus | 0 | 750 |
|
ENSMUST00000155395
|
Pde9a-012 | retained_intron | Mus_musculus | 0 | 638 |
|
ENSMUST00000130547
|
Pde9a-011 | retained_intron | Mus_musculus | 0 | 610 |
|
ENSDART00000111973
|
CABZ01044346.1-201 | protein_coding | Danio_rerio | 0 | 512 |
|
ENSDART00000114937
|
CR848033.1-201 | protein_coding | Danio_rerio | 0 | 501 |
|
ENSMUST00000154392
|
Pde9a-013 | protein_coding | Mus_musculus | 0 | 361 |
|
ENSMUST00000155113
|
Pde9a-014 | processed_transcript | Mus_musculus | 0.00000000002 | 75 |
