C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 9A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047168 Pde9a-001 ENSMUSG00000041119 10090 + 17:31386234-31476310 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000047168
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000047168 1.738±0.71 0.279±0.05 5.860±2.46 7.603±2.64 1.623±0.42 24.478±6.39 1.115±0.26 7.026±1.26 4.978±4.33 7.266±1.15 0.173±0.00 1.983±1.42 3.119±0.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QJ CIL_0008QJ_0002 VISTA 17:31053737-31653776
CIL_0001JT CIL_0001JT_0002 CGP 17:31295483-31476310
CIL_0001D2 CIL_0001D2_0003 CGP 17:31386234-31519974

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005829 IEA cytosol
GO:0008152 IDA:IEA metabolic process
GO:0019934 IEA cGMP-mediated signaling
GO:0043204 IEA perikaryon
GO:0046872 IEA metal ion binding
GO:0047555 IDA 3',5'-cyclic-GMP phosphodiesterase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291539 PDE9A-016 protein_coding Homo_sapiens 0 1489
ENST00000328862 PDE9A-012 protein_coding Homo_sapiens 0 1489
ENST00000335440 PDE9A-013 protein_coding Homo_sapiens 0 1452
ENST00000335512 PDE9A-008 protein_coding Homo_sapiens 0 1860
ENST00000349112 PDE9A-004 protein_coding Homo_sapiens 0 1452
ENST00000380328 PDE9A-001 protein_coding Homo_sapiens 0 1452
ENST00000398224 PDE9A-005 protein_coding Homo_sapiens 0 1528
ENST00000398225 PDE9A-014 protein_coding Homo_sapiens 0 1489
ENST00000398227 PDE9A-020 protein_coding Homo_sapiens 0 1452
ENST00000398229 PDE9A-019 protein_coding Homo_sapiens 0 1450
ENST00000398232 PDE9A-006 protein_coding Homo_sapiens 0 1489
ENST00000398234 PDE9A-009 protein_coding Homo_sapiens 0 1622
ENST00000398236 PDE9A-010 protein_coding Homo_sapiens 0 1524
ENST00000460989 PDE9A-021 processed_transcript Homo_sapiens 0 1277
ENST00000462571 PDE9A-007 processed_transcript Homo_sapiens 0 1489
ENST00000466472 PDE9A-028 processed_transcript Homo_sapiens 0 294
ENST00000467162 PDE9A-026 processed_transcript Homo_sapiens 0 551
ENST00000467403 PDE9A-022 processed_transcript Homo_sapiens 0 1489
ENST00000468805 PDE9A-011 processed_transcript Homo_sapiens 0 1452
ENST00000470987 PDE9A-002 processed_transcript Homo_sapiens 0 1522
ENST00000489319 PDE9A-023 retained_intron Homo_sapiens 0 1083
ENST00000490803 PDE9A-017 processed_transcript Homo_sapiens 0 1489
ENST00000495343 PDE9A-018 processed_transcript Homo_sapiens 0 1277
ENST00000495521 PDE9A-003 processed_transcript Homo_sapiens 0 1277
ENST00000497805 PDE9A-015 processed_transcript Homo_sapiens 0 1458

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