C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphodiesterase 9A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160191 PDE9A 9606 + 21:42653636-42775509 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000291539 PDE9A-016 42653755-42775509 protein_coding
  ENST00000328862 PDE9A-012 42653779-42775509 protein_coding
  ENST00000335440 PDE9A-013 42653779-42775509 protein_coding
  ENST00000335512 PDE9A-008 42653750-42775509 protein_coding
  ENST00000349112 PDE9A-004 42653813-42775509 protein_coding
  ENST00000380328 PDE9A-001 42653779-42775509 protein_coding
  ENST00000398224 PDE9A-005 42653813-42775509 protein_coding
  ENST00000398225 PDE9A-014 42653779-42775509 protein_coding
  ENST00000398227 PDE9A-020 42653779-42775509 protein_coding
  ENST00000398229 PDE9A-019 42653779-42775509 protein_coding
  ENST00000398232 PDE9A-006 42653779-42775509 protein_coding
  ENST00000398234 PDE9A-009 42653779-42775509 protein_coding
  ENST00000398236 PDE9A-010 42653779-42775509 protein_coding
  ENST00000460905 PDE9A-024 42653636-42754064 processed_transcript
  ENST00000460989 PDE9A-021 42653779-42775509 processed_transcript
  ENST00000462571 PDE9A-007 42653779-42775509 processed_transcript
  ENST00000466472 PDE9A-028 42762214-42768412 processed_transcript
  ENST00000467162 PDE9A-026 42686197-42762139 processed_transcript
  ENST00000467403 PDE9A-022 42653779-42775509 processed_transcript
  ENST00000468805 PDE9A-011 42653779-42775509 processed_transcript
  ENST00000470987 PDE9A-002 42653755-42775509 processed_transcript
  ENST00000472401 PDE9A-027 42653749-42699038 processed_transcript
  ENST00000486902 PDE9A-025 42653779-42701189 processed_transcript
  ENST00000489319 PDE9A-023 42756775-42775509 retained_intron
  ENST00000490803 PDE9A-017 42653755-42775509 processed_transcript
  ENST00000495343 PDE9A-018 42731758-42775509 processed_transcript
  ENST00000495521 PDE9A-003 42653779-42775509 processed_transcript
  ENST00000497805 PDE9A-015 42653779-42775509 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000291539ENST00000328862ENST00000335440ENST00000335512ENST00000380328ENST00000398224ENST00000398225ENST00000398227ENST00000398232ENST00000398234ENST00000460905ENST00000460989ENST00000466472ENST00000467403ENST00000468805ENST00000489319ENST00000490803ENST00000495343ENST00000497805
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000291539 N/A 2.396±0.00 N/A 0.606±0.00 1.157±0.00 6.369±3.33 1.052±0.00 7.010±0.00 N/A N/A N/A 2.551±0.86 3.828±1.26 0.585±0.00
ENST00000328862 N/A N/A N/A N/A N/A N/A N/A N/A 0.249±0.00 N/A 0.269±0.00 N/A N/A N/A
ENST00000335440 N/A N/A N/A 0.354±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000335512 N/A N/A 0.447±0.00 N/A 0.478±0.00 N/A 0.327±0.00 N/A 3.548±0.00 N/A N/A 1.959±0.62 1.631±0.43 0.742±0.00
ENST00000380328 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.943±0.00 N/A N/A N/A N/A
ENST00000398224 N/A N/A N/A 1.619±0.00 N/A N/A N/A 0.226±0.00 N/A 0.825±0.00 N/A N/A 2.196±0.00 N/A
ENST00000398225 2.324±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.926±0.00 N/A N/A N/A N/A
ENST00000398227 2.601±0.00 3.588±0.00 N/A 1.944±0.00 N/A 10.894±0.00 N/A 3.698±0.00 N/A N/A N/A 2.551±0.99 N/A 1.668±0.00
ENST00000398232 N/A N/A N/A N/A 1.169±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000398234 N/A N/A N/A N/A 1.082±0.00 N/A N/A N/A N/A N/A N/A 0.459±0.00 N/A N/A
ENST00000460905 N/A N/A N/A N/A N/A N/A N/A 0.776±0.00 N/A N/A N/A N/A N/A N/A
ENST00000460989 N/A N/A N/A N/A N/A N/A N/A N/A 0.312±0.00 N/A N/A N/A N/A N/A
ENST00000466472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.090±0.00 N/A 2.704±0.00
ENST00000467403 N/A N/A N/A N/A N/A N/A N/A 3.851±0.00 N/A N/A N/A N/A N/A N/A
ENST00000468805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.647±0.00 N/A N/A
ENST00000489319 N/A N/A N/A N/A N/A 0.655±0.00 N/A N/A N/A N/A 0.296±0.25 N/A N/A N/A
ENST00000490803 N/A N/A N/A 0.812±0.00 1.613±0.00 N/A N/A N/A N/A 0.873±0.00 N/A 0.385±0.00 2.020±0.00 0.751±0.44
ENST00000495343 N/A N/A N/A N/A N/A N/A 0.438±0.00 N/A N/A 2.663±0.00 N/A N/A N/A N/A
ENST00000497805 1.622±0.00 N/A N/A N/A 1.893±0.00 15.646±0.00 N/A N/A N/A N/A N/A N/A N/A 1.268±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QJ CIL_0008QJ_0001 VISTA 21:42290762-42894212
CIL_0001JT CIL_0001JT_0001 CGP 21:42496008-42775509
CIL_0001D2 CIL_0001D2_0002 CGP 21:42653636-42879568

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004114 TAS:IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0007165 TAS:IEA signal transduction
GO:0007596 TAS blood coagulation
GO:0008152 IEA metabolic process
GO:0019934 IEA cGMP-mediated signaling
GO:0042995 IEA cell projection
GO:0043204 IEA perikaryon
GO:0046872 IEA metal ion binding
GO:0047555 IEA 3',5'-cyclic-GMP phosphodiesterase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060280 pde9a phosphodiesterase 9A protein_coding Danio_rerio
ENSDARG00000088368 PDE9A (2 of 2) phosphodiesterase 9A protein_coding Danio_rerio
ENSMUSG00000041119 Pde9a phosphodiesterase 9A protein_coding Mus_musculus

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