C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001D2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088368-ENSDARG00000074007 CGP 7955 9:20503254-20526003
GeneTranscriptPositionBiotype
ENSDARG00000074007 (wdr4)
WD repeat domain 4 		ENSDART00000111634 (wdr4-201) 20514266-20526003 protein_coding
ENSDARG00000088368 (PDE9A (2 of 2))
phosphodiesterase 9A 		ENSDART00000125842 (PDE9A (2 of 2)-201) 20503254-20508199 protein_coding
CIL_0001D2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160191-ENSG00000160193 CGP 9606 21:42653636-42879568
GeneTranscriptPositionBiotype
ENSG00000160191 (PDE9A)
phosphodiesterase 9A 		ENST00000291539 (PDE9A-016) 42653755-42775509 protein_coding
ENST00000328862 (PDE9A-012) 42653779-42775509 protein_coding
ENST00000335440 (PDE9A-013) 42653779-42775509 protein_coding
ENST00000335512 (PDE9A-008) 42653750-42775509 protein_coding
ENST00000349112 (PDE9A-004) 42653813-42775509 protein_coding
ENST00000380328 (PDE9A-001) 42653779-42775509 protein_coding
ENST00000398224 (PDE9A-005) 42653813-42775509 protein_coding
ENST00000398225 (PDE9A-014) 42653779-42775509 protein_coding
ENST00000398227 (PDE9A-020) 42653779-42775509 protein_coding
ENST00000398229 (PDE9A-019) 42653779-42775509 protein_coding
ENST00000398232 (PDE9A-006) 42653779-42775509 protein_coding
ENST00000398234 (PDE9A-009) 42653779-42775509 protein_coding
ENST00000398236 (PDE9A-010) 42653779-42775509 protein_coding
ENST00000460905 (PDE9A-024) 42653636-42754064 processed_transcript
ENST00000460989 (PDE9A-021) 42653779-42775509 processed_transcript
ENST00000462571 (PDE9A-007) 42653779-42775509 processed_transcript
ENST00000466472 (PDE9A-028) 42762214-42768412 processed_transcript
ENST00000467162 (PDE9A-026) 42686197-42762139 processed_transcript
ENST00000467403 (PDE9A-022) 42653779-42775509 processed_transcript
ENST00000468805 (PDE9A-011) 42653779-42775509 processed_transcript
ENST00000470987 (PDE9A-002) 42653755-42775509 processed_transcript
ENST00000472401 (PDE9A-027) 42653749-42699038 processed_transcript
ENST00000486902 (PDE9A-025) 42653779-42701189 processed_transcript
ENST00000489319 (PDE9A-023) 42756775-42775509 retained_intron
ENST00000490803 (PDE9A-017) 42653755-42775509 processed_transcript
ENST00000495343 (PDE9A-018) 42731758-42775509 processed_transcript
ENST00000495521 (PDE9A-003) 42653779-42775509 processed_transcript
ENST00000497805 (PDE9A-015) 42653779-42775509 processed_transcript
ENSG00000160193 (WDR4)
WD repeat domain 4 		ENST00000330317 (WDR4-004) 42843094-42879531 protein_coding
ENST00000398208 (WDR4-001) 42849226-42879555 protein_coding
ENST00000463902 (WDR4-005) 42855684-42879546 processed_transcript
ENST00000470658 (WDR4-006) 42862282-42879510 processed_transcript
ENST00000476326 (WDR4-002) 42849226-42879568 processed_transcript
ENST00000479429 (WDR4-007) 42854562-42879515 processed_transcript
ENST00000492742 (WDR4-003) 42849226-42879275 processed_transcript
ENSG00000225218 (AP001628.6)
 ENST00000431150 (AP001628.6-001) 42831040-42836477 lincRNA
ENSG00000225731 (AP001627.1)
 ENST00000437426 (AP001627.1-001) 42733594-42741758 antisense
ENSG00000233754 (AP001628.7)
 ENST00000420273 (AP001628.7-001) 42781074-42782233 lincRNA
CIL_0001D2_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041119-ENSMUSG00000024037 CGP 10090 17:31386234-31519974
GeneTranscriptPositionBiotype
ENSMUSG00000041119 (Pde9a)
phosphodiesterase 9A 		ENSMUST00000047168 (Pde9a-001) 31386234-31476310 protein_coding
ENSMUST00000124902 (Pde9a-008) 31386274-31476159 nonsense_mediated_decay
ENSMUST00000127929 (Pde9a-002) 31386254-31476159 protein_coding
ENSMUST00000130547 (Pde9a-011) 31442932-31460191 retained_intron
ENSMUST00000131417 (Pde9a-004) 31386249-31476156 nonsense_mediated_decay
ENSMUST00000134525 (Pde9a-006) 31386249-31476156 protein_coding
ENSMUST00000136384 (Pde9a-010) 31433071-31459129 protein_coding
ENSMUST00000137927 (Pde9a-005) 31386262-31476081 nonsense_mediated_decay
ENSMUST00000141314 (Pde9a-009) 31386294-31455122 nonsense_mediated_decay
ENSMUST00000143549 (Pde9a-003) 31386249-31476156 nonsense_mediated_decay
ENSMUST00000154392 (Pde9a-013) 31461628-31476141 protein_coding
ENSMUST00000154567 (Pde9a-007) 31386276-31471795 retained_intron
ENSMUST00000155113 (Pde9a-014) 31471041-31476106 processed_transcript
ENSMUST00000155395 (Pde9a-012) 31453332-31461700 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001D2_0001ENSDARG00000074007ENSDART00000111634ENSDARG00000088368ENSDART00000125842CIL_0001D2_0002ENSG00000160191ENST00000291539ENST00000328862ENST00000335440ENST00000335512ENST00000349112ENST00000380328ENST00000398224ENST00000398225ENST00000398227ENST00000398229ENST00000398232ENST00000398234ENST00000398236ENST00000460905ENST00000460989ENST00000462571ENST00000466472ENST00000467162ENST00000467403ENST00000468805ENST00000470987ENST00000472401ENST00000486902ENST00000489319ENST00000490803ENST00000495343ENST00000495521ENST00000497805ENSG00000160193ENST00000330317ENST00000398208ENST00000463902ENST00000470658ENST00000476326ENST00000479429ENST00000492742ENSG00000225218ENST00000431150ENSG00000225731ENST00000437426ENSG00000233754ENST00000420273CIL_0001D2_0003ENSMUSG00000041119ENSMUST00000047168ENSMUST00000124902ENSMUST00000127929ENSMUST00000130547ENSMUST00000131417ENSMUST00000134525ENSMUST00000136384ENSMUST00000137927ENSMUST00000141314ENSMUST00000143549ENSMUST00000154392ENSMUST00000154567ENSMUST00000155113ENSMUST00000155395
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001D2_0001ENSDARG00000074007ENSDART00000111634ENSDARG00000088368ENSDART00000125842CIL_0001D2_0002ENSG00000160191ENST00000291539ENST00000328862ENST00000335440ENST00000335512ENST00000380328ENST00000398224ENST00000398225ENST00000398227ENST00000398232ENST00000398234ENST00000460905ENST00000460989ENST00000466472ENST00000467403ENST00000468805ENST00000489319ENST00000490803ENST00000495343ENST00000497805ENSG00000160193ENST00000330317ENST00000398208ENST00000470658ENST00000476326ENST00000479429ENSG00000225218ENST00000431150ENSG00000225731ENST00000437426ENSG00000233754ENST00000420273CIL_0001D2_0003ENSMUSG00000041119ENSMUST00000047168ENSMUST00000124902ENSMUST00000127929ENSMUST00000131417ENSMUST00000134525ENSMUST00000136384ENSMUST00000137927ENSMUST00000141314ENSMUST00000143549ENSMUST00000154392ENSMUST00000154567ENSMUST00000155113ENSMUST00000155395
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000074007 ENSDART00000111634 N/A N/A N/A 0.245±0.17 N/A N/A 0.253±0.08 0.616±0.60 0.173±0.00 N/A N/A N/A N/A N/A
ENSDARG00000088368 ENSDART00000125842 N/A N/A N/A 1.993±0.00 N/A N/A 2.733±0.00 1.649±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160191 ENST00000291539 N/A 2.396±0.00 N/A 0.606±0.00 1.157±0.00 6.369±3.33 1.052±0.00 7.010±0.00 N/A N/A N/A 2.551±0.86 3.828±1.26 0.585±0.00
ENST00000328862 N/A N/A N/A N/A N/A N/A N/A N/A 0.249±0.00 N/A 0.269±0.00 N/A N/A N/A
ENST00000335440 N/A N/A N/A 0.354±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000335512 N/A N/A 0.447±0.00 N/A 0.478±0.00 N/A 0.327±0.00 N/A 3.548±0.00 N/A N/A 1.959±0.62 1.631±0.43 0.742±0.00
ENST00000349112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380328 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.943±0.00 N/A N/A N/A N/A
ENST00000398224 N/A N/A N/A 1.619±0.00 N/A N/A N/A 0.226±0.00 N/A 0.825±0.00 N/A N/A 2.196±0.00 N/A
ENST00000398225 2.324±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.926±0.00 N/A N/A N/A N/A
ENST00000398227 2.601±0.00 3.588±0.00 N/A 1.944±0.00 N/A 10.894±0.00 N/A 3.698±0.00 N/A N/A N/A 2.551±0.99 N/A 1.668±0.00
ENST00000398229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000398232 N/A N/A N/A N/A 1.169±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000398234 N/A N/A N/A N/A 1.082±0.00 N/A N/A N/A N/A N/A N/A 0.459±0.00 N/A N/A
ENST00000398236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460905 N/A N/A N/A N/A N/A N/A N/A 0.776±0.00 N/A N/A N/A N/A N/A N/A
ENST00000460989 N/A N/A N/A N/A N/A N/A N/A N/A 0.312±0.00 N/A N/A N/A N/A N/A
ENST00000462571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.090±0.00 N/A 2.704±0.00
ENST00000467162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467403 N/A N/A N/A N/A N/A N/A N/A 3.851±0.00 N/A N/A N/A N/A N/A N/A
ENST00000468805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.647±0.00 N/A N/A
ENST00000470987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489319 N/A N/A N/A N/A N/A 0.655±0.00 N/A N/A N/A N/A 0.296±0.25 N/A N/A N/A
ENST00000490803 N/A N/A N/A 0.812±0.00 1.613±0.00 N/A N/A N/A N/A 0.873±0.00 N/A 0.385±0.00 2.020±0.00 0.751±0.44
ENST00000495343 N/A N/A N/A N/A N/A N/A 0.438±0.00 N/A N/A 2.663±0.00 N/A N/A N/A N/A
ENST00000495521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497805 1.622±0.00 N/A N/A N/A 1.893±0.00 15.646±0.00 N/A N/A N/A N/A N/A N/A N/A 1.268±0.00
ENSG00000160193 ENST00000330317 1.339±0.00 2.526±0.00 N/A 0.582±0.40 1.318±0.00 0.799±0.00 0.193±0.14 2.208±0.00 2.392±1.90 N/A N/A 3.389±3.02 2.335±0.40 1.745±0.66
ENST00000398208 N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A 1.353±0.00 0.687±0.38 1.028±0.00 0.839±0.07
ENST00000463902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470658 N/A N/A 0.379±0.00 N/A 1.371±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476326 N/A N/A N/A N/A N/A N/A 0.163±0.00 0.179±0.00 N/A N/A N/A N/A 0.574±0.00 N/A
ENST00000479429 1.236±0.00 N/A N/A N/A N/A 1.695±0.00 N/A N/A N/A N/A N/A 1.982±0.00 N/A 1.788±0.00
ENST00000492742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225218 ENST00000431150 0.335±0.00 N/A N/A 0.157±0.00 N/A N/A N/A 0.531±0.00 N/A N/A N/A N/A 0.094±0.00 0.296±0.17
ENSG00000225731 ENST00000437426 0.050±0.00 0.147±0.00 0.672±0.00 0.037±0.02 0.244±0.12 0.360±0.30 0.140±0.01 0.155±0.11 0.070±0.06 0.129±0.02 0.008±0.00 0.034±0.00 0.121±0.05 0.535±0.40
ENSG00000233754 ENST00000420273 0.054±0.00 N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A 0.088±0.00 N/A 0.178±0.11 0.105±0.00 0.082±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041119 ENSMUST00000047168 1.738±0.71 0.279±0.05 5.860±2.46 7.603±2.64 1.623±0.42 24.478±6.39 1.115±0.26 7.026±1.26 4.978±4.33 7.266±1.15 0.173±0.00 1.983±1.42 3.119±0.87 N/A
ENSMUST00000124902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.265±0.00 N/A N/A N/A
ENSMUST00000127929 1.272±0.42 0.259±0.11 4.988±0.88 4.881±2.50 1.705±0.55 27.258±9.96 1.159±0.16 7.062±1.43 3.721±4.52 14.497±5.92 0.262±0.10 2.408±1.36 3.012±0.79 N/A
ENSMUST00000130547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131417 N/A N/A N/A N/A 1.035±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134525 N/A N/A N/A N/A N/A N/A N/A N/A 0.676±0.00 N/A N/A N/A N/A N/A
ENSMUST00000136384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.537±0.00 N/A 13.965±0.00 N/A
ENSMUST00000137927 N/A N/A N/A 2.696±0.00 N/A N/A N/A N/A N/A N/A 0.287±0.00 N/A 4.055±1.79 0.245±0.00
ENSMUST00000141314 N/A N/A N/A 8.473±0.00 N/A N/A N/A N/A N/A N/A N/A 1.863±0.00 6.405±0.00 N/A
ENSMUST00000143549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A N/A N/A
ENSMUST00000154392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.292±0.12 N/A 9.054±4.83 N/A
ENSMUST00000154567 2.564±1.01 0.552±0.20 2.132±0.00 2.902±0.00 2.095±0.39 42.798±8.98 0.942±0.14 5.624±1.87 2.917±2.41 12.958±3.00 0.162±0.07 2.236±1.13 2.610±1.38 N/A
ENSMUST00000155113 N/A 1.172±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.619±0.00 6.089±0.00 2.833±1.31
ENSMUST00000155395 6.185±2.75 N/A N/A N/A 3.628±0.87 85.290±23.64 N/A N/A N/A N/A 0.354±0.00 7.825±1.25 6.202±0.00 N/A

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