C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU class 1 homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000350375 POU1F1-001 ENSG00000064835 9606 - 3:87259404-87276587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLungOvaryPlacentaTestisENST00000350375
Transcript ID Adrenal Brain Breast Heart Kidney Lung Ovary Placenta Testis
ENST00000350375 0.055±0.00 0.133±0.00 0.045±0.00 0.058±0.00 0.053±0.00 0.114±0.00 0.024±0.01 0.055±0.00 0.019±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022L CIL_00022L_0002 CGP 3:87259404-87993835

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001102 IPI RNA polymerase II activating transcription factor binding
GO:0001105 IDA RNA polymerase II transcription coactivator activity
GO:0003677 IEA DNA binding
GO:0003700 IDA:IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0008285 TAS negative regulation of cell proliferation
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176330 Pou1f1-001 protein_coding Mus_musculus 0 1133
ENSMUST00000004964 Pou1f1-201 protein_coding Mus_musculus 0 869
ENSMUST00000176038 Pou1f1-002 protein_coding Mus_musculus 0 869
ENSMUST00000184525 Pou1f1-004 protein_coding Mus_musculus 0 867
ENSMUST00000175882 Pou1f1-003 retained_intron Mus_musculus 0 388

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