C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 1 open reading frame 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000350592 C1orf43-001 ENSG00000143612 9606 - 1:154206720-154220624 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000350592
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000350592 37.820±0.00 26.330±0.00 7.715±0.00 31.525±0.00 14.762±10.98 5.233±0.00 39.843±0.00 22.036±16.12 34.768±30.87 48.693±0.00 33.347±0.00 11.680±2.32 21.746±1.19 10.833±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160640 4933434E20Rik-001 protein_coding Mus_musculus 0 749
ENSMUST00000159064 4933434E20Rik-006 protein_coding Mus_musculus 0 749
ENSMUST00000168894 Gm7664-201 processed_pseudogene Mus_musculus 0 651
ENSMUST00000099450 Gm6478-201 processed_pseudogene Mus_musculus 0 603
ENSMUST00000161874 4933434E20Rik-009 retained_intron Mus_musculus 0 514
ENSMUST00000161918 4933434E20Rik-002 nonsense_mediated_decay Mus_musculus 0 514
ENSMUST00000162114 4933434E20Rik-005 protein_coding Mus_musculus 0 514
ENSMUST00000029552 4933434E20Rik-004 protein_coding Mus_musculus 0 514
ENSMUST00000068798 4933434E20Rik-003 protein_coding Mus_musculus 0 512
ENSMUST00000162390 4933434E20Rik-010 retained_intron Mus_musculus 0 316

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