C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4933434E20 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161918 4933434E20Rik-002 ENSMUSG00000027942 10090 + 3:90052871-90062445 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161918
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161918 9.874±2.82 7.281±2.55 16.933±0.13 10.376±4.21 6.864±1.87 5.943±2.23 10.537±0.93 11.909±2.57 6.838±1.96 8.441±1.28 12.880±1.77 12.540±3.78 14.744±6.21 19.986±0.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350592 C1orf43-001 protein_coding Homo_sapiens 0 514
ENST00000362076 C1orf43-004 protein_coding Homo_sapiens 0 514
ENST00000368516 C1orf43-009 protein_coding Homo_sapiens 0 279
ENST00000368518 C1orf43-003 protein_coding Homo_sapiens 0 279
ENST00000368519 C1orf43-006 protein_coding Homo_sapiens 0 514
ENST00000368521 C1orf43-002 protein_coding Homo_sapiens 0 514
ENST00000483282 C1orf43-008 processed_transcript Homo_sapiens 0 239
ENST00000493814 C1orf43-005 processed_transcript Homo_sapiens 0 405

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