C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4933434E20 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162114 4933434E20Rik-005 ENSMUSG00000027942 10090 + 3:90052842-90060994 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000162114
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000162114 5.054±0.38 2.447±0.22 5.278±0.76 3.034±0.41 4.304±0.32 6.794±0.61 4.228±0.78 6.954±0.47 5.549±0.59 6.880±1.31

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329627 PEX26-001 protein_coding Homo_sapiens 0.00009 57
ENST00000350592 C1orf43-001 protein_coding Homo_sapiens 0 514
ENST00000362076 C1orf43-004 protein_coding Homo_sapiens 0 278
ENST00000368516 C1orf43-009 protein_coding Homo_sapiens 0 514
ENST00000368518 C1orf43-003 protein_coding Homo_sapiens 0 760
ENST00000368519 C1orf43-006 protein_coding Homo_sapiens 0 278
ENST00000368521 C1orf43-002 protein_coding Homo_sapiens 0 760
ENST00000371375 PLCE1-002 protein_coding Homo_sapiens 0.00000002 68
ENST00000464214 PLCE1-003 processed_transcript Homo_sapiens 0.000000002 68
ENST00000493814 C1orf43-005 processed_transcript Homo_sapiens 0 279
ENST00000509206 RNF4-016 processed_transcript Homo_sapiens 0.00000000002 73
ENST00000511892 RNF4-015 processed_transcript Homo_sapiens 0.00000000003 73
ENST00000590400 KANK2-006 retained_intron Homo_sapiens 0.00000002 66

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