C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 4 (proto-oncogene)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000351842 USP4-001 ENSG00000114316 9606 - 3:49277831-49340033 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000351842
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000351842 10.923±0.00 12.947±0.00 1.034±0.00 4.659±4.06 8.551±5.96 5.462±3.80 3.324±2.89 12.787±0.00 3.108±2.18 10.877±0.00 4.878±3.95 6.412±3.41 10.037±1.93 14.276±1.90

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000244 IMP spliceosomal tri-snRNP complex assembly
GO:0004221 IMP ubiquitin thiolesterase activity
GO:0004843 IDA:IEA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005764 TAS lysosome
GO:0005886 IDA plasma membrane
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016579 IDA protein deubiquitination
GO:0031397 IMP negative regulation of protein ubiquitination
GO:0031647 IDA regulation of protein stability
GO:0031685 IPI adenosine receptor binding
GO:0034394 IDA protein localization to cell surface
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0042802 IPI identical protein binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035237 Usp4-201 protein_coding Mus_musculus 0 2372

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