C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fatty acyl CoA reductase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354817 FAR1-001 ENSG00000197601 9606 + 11:13668670-13732346 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354817
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354817 4.929±0.00 4.857±0.00 8.734±0.84 6.377±0.36 6.236±1.35 3.040±1.69 6.990±0.00 0.434±0.00 3.697±0.62 1.699±0.85 6.034±1.41 3.000±0.48 4.396±1.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PL CIL_0003PL_0001 CGP 11:13492055-13732346

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005777 IDA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0005782 TAS peroxisomal matrix
GO:0008611 IMP ether lipid biosynthetic process
GO:0010025 IEA wax biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0035336 IDA long-chain fatty-acyl-CoA metabolic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 IDA glycerophospholipid biosynthetic process
GO:0050062 IEA long-chain-fatty-acyl-CoA reductase activity
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process
GO:0080019 IEA:IDA fatty-acyl-CoA reductase (alcohol-forming) activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164745 Far1-201 protein_coding Mus_musculus 0 2591
ENSMUST00000033018 Far1-001 protein_coding Mus_musculus 0 2591
ENSMUST00000067929 Far1-003 protein_coding Mus_musculus 0 2237
ENSMUST00000123845 Far1-002 retained_intron Mus_musculus 0 955
ENSMUST00000136158 Far1-008 protein_coding Mus_musculus 0 835
ENSMUST00000123591 Far1-004 retained_intron Mus_musculus 0 785
ENSMUST00000129087 Far1-005 protein_coding Mus_musculus 0 730
ENSMUST00000155183 Far1-009 retained_intron Mus_musculus 0 440
ENSMUST00000151133 Far1-010 retained_intron Mus_musculus 0 340

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